EnhancerDB
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  3. rs557092338[chr1:27749700]
Enhancers that have rs557092338[chr1:27749700]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557092338[chr1:27749700]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27749695 27749716 IRF1 JASPAR yes 27692054
chr1 27749699 27749714 FOXP1 JASPAR yes 27692055
chr1 27749700 27749715 FOXP1 JASPAR yes 27692056
Genes associated with rs557092338[chr1:27749700], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More