EnhancerDB
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  3. rs55714460[chr3:58019124]
Enhancers that have rs55714460[chr3:58019124]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55714460[chr3:58019124]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58019114 58019135 IRF1 JASPAR yes 2666873
chr3 58019116 58019131 STAT2 JASPAR yes 2666874
chr3 58019118 58019130 IRF1 JASPAR yes 2666875
chr3 58019120 58019126 TCF4 TRANSFAC yes 2666876
chr3 58019120 58019135 FOXP1 JASPAR yes 2666877
chr3 58019121 58019132 FOXP2 JASPAR yes 2666878
chr3 58019121 58019133 FOXC2 JASPAR yes 2666879
Genes associated with rs55714460[chr3:58019124], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More