EnhancerDB
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  3. rs557165931[chr19:2489189]
Enhancers that have rs557165931[chr19:2489189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2481141 2509475 enh4958
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs557165931[chr19:2489189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2487107 2490254 TCF7L2 GTRD no Colon (HCT116) 108360382
chr19 2487601 2489790 TCF7L2 GTRD no Colon (HCT116) 108360383
chr19 2487661 2489954 TCF7L2 GTRD no Colon (HCT116) 108360384
chr19 2487763 2490018 TCF7L2 GTRD no Colon (HCT116) 108360385
chr19 2487775 2489823 TCF7L2 GTRD no Colon (HCT116) 108360386
chr19 2487933 2489965 TCF7L2 GTRD no Colon (HCT116) 108360387
chr19 2487990 2490105 ZNF274 GTRD no Blood (GM12878) 108360388
chr19 2488428 2489968 ZNF274 GTRD no Blood (GM12878) 108360389
chr19 2488527 2489703 ZBTB33 GTRD no Brain (SK-N-SH) 108360390
chr19 2488602 2490089 ZNF143 GTRD no Epithelial (MCF-7) 21835501
chr19 2488602 2490089 ZNF143 GTRD no Epithelial (MCF-7) 108360391
chr19 2488665 2490101 ZBTB33 GTRD no Lung (A549) 108360392
chr19 2488713 2489638 TCF7L2 GTRD no Colon (HCT116) 108360393
chr19 2488740 2490112 ZNF274 GTRD no Cervix (HeLa-S3) 21835502
chr19 2488740 2490112 ZNF274 GTRD no Cervix (HeLa-S3) 108360394
chr19 2488775 2489966 TCF7L2 GTRD no Colon (HCT116) 108360395
chr19 2488870 2489667 TCF7L2 GTRD no Colon (HCT116) 108360396
chr19 2488877 2489530 ZNF274 GTRD no Liver (HepG2) 21835503
chr19 2488877 2489530 ZNF274 GTRD no Liver (HepG2) 108360397
chr19 2488894 2489770 ZNF274 GTRD no Blood (GM12878) 108360398
chr19 2488932 2489394 TCF7L2 GTRD no Colon (HCT116) 108360399
chr19 2488953 2489795 ZNF143 GTRD no Epithelial (MCF-7) 21835504
chr19 2488953 2489795 ZNF143 GTRD no Epithelial (MCF-7) 108360400
chr19 2488956 2489946 ZNF143 GTRD no Epithelial (MCF-7) 21835505
chr19 2488956 2489946 ZNF143 GTRD no Epithelial (MCF-7) 108360401
chr19 2488966 2489632 TCF7L2 GTRD no Colon (HCT116) 108360402
chr19 2488983 2489800 ZNF274 GTRD no Cervix (HeLa-S3) 21835506
chr19 2488983 2489800 ZNF274 GTRD no Cervix (HeLa-S3) 108360403
chr19 2489022 2489438 ZNF274 GTRD no Bone Marrow (K562) 21835507
chr19 2489022 2489438 ZNF274 GTRD no Bone Marrow (K562) 108360404
chr19 2489023 2489679 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21835508
chr19 2489023 2489679 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108360405
chr19 2489040 2489787 ZBTB33 GTRD no Brain (SK-N-SH) 108360406
chr19 2489076 2489631 ZNF143 GTRD no Epithelial (MCF-7) 21835509
chr19 2489076 2489631 ZNF143 GTRD no Epithelial (MCF-7) 108360407
chr19 2489088 2489808 ZNF143 GTRD no Epithelial (MCF-7) 21835510
chr19 2489088 2489808 ZNF143 GTRD no Epithelial (MCF-7) 108360408
chr19 2489089 2489744 ZNF143 GTRD no Epithelial (MCF-7) 21835511
chr19 2489089 2489744 ZNF143 GTRD no Epithelial (MCF-7) 108360409
chr19 2489108 2489961 ZNF143 GTRD no Epithelial (MCF-7) 21835512
chr19 2489108 2489961 ZNF143 GTRD no Epithelial (MCF-7) 108360410
chr19 2489127 2489723 ZNF143 GTRD no Epithelial (MCF-7) 21835513
chr19 2489127 2489723 ZNF143 GTRD no Epithelial (MCF-7) 108360411
chr19 2489149 2489519 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835514
chr19 2489149 2489519 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108360412
chr19 2489170 2489534 ZBTB33 GTRD no Lung (A549) 108360413
chr19 2489173 2489765 ZNF143 GTRD no Epithelial (MCF-7) 21835515
chr19 2489173 2489765 ZNF143 GTRD no Epithelial (MCF-7) 108360414
chr19 2489174 2489847 ZNF143 GTRD no Epithelial (MCF-7) 21835516
chr19 2489174 2489847 ZNF143 GTRD no Epithelial (MCF-7) 108360415
chr19 2489189 2489201 INSM1 JASPAR yes 112065621
Genes associated with rs557165931[chr19:2489189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More