EnhancerDB
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  3. rs557252169[chr1:173390651]
Enhancers that have rs557252169[chr1:173390651]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs557252169[chr1:173390651]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173390639 173390658 CTCF JASPAR yes 33198221
chr1 173390643 173390653 MSC JASPAR yes 33198222
chr1 173390650 173390661 HOXC13 JASPAR yes 33198223
Genes associated with rs557252169[chr1:173390651], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More