EnhancerDB
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  3. rs55726214[chr2:232550590]
Enhancers that have rs55726214[chr2:232550590]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55726214[chr2:232550590]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232550583 232550592 HIC2 JASPAR yes 81736567
chr2 232550585 232550592 SP1 TRANSFAC yes 81736568
chr2 232550587 232550592 SP1 TRANSFAC yes 81736569
Genes associated with rs55726214[chr2:232550590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More