EnhancerDB
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  3. rs557309546[chr1:234682150]
Enhancers that have rs557309546[chr1:234682150]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557309546[chr1:234682150]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234681702 234682716 ZNF274 GTRD no Bone Marrow (K562) 21394315
chr1 234681849 234682229 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21394326
chr1 234681861 234682620 ZNF274 GTRD no Bone Marrow (K562) 21394327
chr1 234681945 234682215 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21394330
chr1 234682143 234682159 ZNF143 JASPAR yes 36286656
Genes associated with rs557309546[chr1:234682150], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More