EnhancerDB
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  3. rs557342314[chr1:205268762]
Enhancers that have rs557342314[chr1:205268762]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205259785 205270135 enh12589
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs557342314[chr1:205268762]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205268718 205269614 TCF7L2 GTRD no Colon (HCT116) 21371749
chr1 205268753 205268768 TFAP2A JASPAR yes 34753335
chr1 205268753 205268768 TFAP2C JASPAR yes 34753336
chr1 205268756 205268767 TFAP2A JASPAR yes 34753337
chr1 205268756 205268767 TFAP2B JASPAR yes 34753338
chr1 205268756 205268767 TFAP2C JASPAR yes 34753339
Genes associated with rs557342314[chr1:205268762], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More