EnhancerDB
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  3. rs55734934[chr1:39618026]
Enhancers that have rs55734934[chr1:39618026]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55734934[chr1:39618026]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39618016 39618028 PBX1 JASPAR yes 28259186
chr1 39618022 39618027 GATA2 JASPAR yes 28259187
chr1 39618025 39618036 PROP1 JASPAR yes 28259188
Genes associated with rs55734934[chr1:39618026], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More