EnhancerDB
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  3. rs557400983[chr12:122586113]
Enhancers that have rs557400983[chr12:122586113]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs557400983[chr12:122586113]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122586098 122586114 POU4F2 JASPAR yes 124265587
chr12 122586098 122586114 POU4F3 JASPAR yes 124265588
chr12 122586099 122586114 FOXA1 JASPAR yes 124265590
chr12 122586100 122586114 POU4F1 JASPAR yes 124265592
chr12 122586100 122586115 FOXP1 JASPAR yes 124265593
chr12 122586100 122586115 HNF1A JASPAR yes 124265594
chr12 122586101 122586113 FOXC2 JASPAR yes 124265595
chr12 122586101 122586115 ONECUT2 JASPAR yes 124265596
chr12 122586101 122586115 ONECUT3 JASPAR yes 124265597
chr12 122586102 122586113 FOXB1 JASPAR yes 124265598
chr12 122586102 122586113 FOXC1 JASPAR yes 124265599
chr12 122586102 122586113 PROP1 JASPAR yes 124265600
chr12 122586103 122586118 FOXA1 JASPAR yes 124265602
chr12 122586104 122586116 FOXI1 JASPAR yes 124265603
chr12 122586104 122586119 FOXP1 JASPAR yes 124265604
chr12 122586105 122586117 FOXC2 JASPAR yes 124265605
chr12 122586105 122586119 ONECUT2 JASPAR yes 124265606
chr12 122586105 122586119 ONECUT3 JASPAR yes 124265607
chr12 122586106 122586117 FOXB1 JASPAR yes 124265608
chr12 122586106 122586117 FOXC1 JASPAR yes 124265609
chr12 122586109 122586130 IRF1 JASPAR yes 124265611
chr12 122586111 122586115 YY1 TRANSFAC yes 124265612
chr12 122586111 122586126 FOXP1 JASPAR yes 124265613
chr12 122586111 122586132 IRF1 JASPAR yes 124265614
Genes associated with rs557400983[chr12:122586113], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More