EnhancerDB
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  3. rs557413262[chr17:55548812]
Enhancers that have rs557413262[chr17:55548812]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs557413262[chr17:55548812]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55548798 55548814 ZNF143 JASPAR yes 54958510
chr17 55548803 55548822 PAX5 JASPAR yes 54958511
chr17 55548806 55548815 HIC2 JASPAR yes 54958512
Genes associated with rs557413262[chr17:55548812], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More