EnhancerDB
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  3. rs557522843[chr1:226852443]
Enhancers that have rs557522843[chr1:226852443]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226852222 226852636 vista5369
VISTA
Transcript factors that have rs557522843[chr1:226852443]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226852435 226852448 HSF1 JASPAR yes 35829656
chr1 226852435 226852448 HSF1 JASPAR yes 118471755
chr1 226852442 226852448 ETS1 JASPAR yes 35829657
chr1 226852442 226852448 ETS1 JASPAR yes 118471756
chr1 226852443 226852456 ELF1 JASPAR yes 35829658
chr1 226852443 226852456 ELF1 JASPAR yes 118471757
Genes associated with rs557522843[chr1:226852443], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More