EnhancerDB
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  3. rs557554295[chr2:238609453]
Enhancers that have rs557554295[chr2:238609453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238592145 238619475 enh19401
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr2 238609405 238609661 vista35431
VISTA
Transcript factors that have rs557554295[chr2:238609453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238609276 238609592 EBF1 UCSC Txn Factor no Conserved 108435952
chr2 238609440 238609454 GLIS2 JASPAR yes 22242691
chr2 238609440 238609454 GLIS2 JASPAR yes 82134367
chr2 238609452 238609460 TBX15 JASPAR yes 22242692
chr2 238609452 238609460 TBX15 JASPAR yes 82134368
chr2 238609452 238609465 SMAD2 JASPAR yes 22242693
chr2 238609452 238609465 SMAD2 JASPAR yes 82134369
chr2 238609453 238609458 SP1 TRANSFAC yes 22242694
chr2 238609453 238609458 SP1 TRANSFAC yes 82134370
Genes associated with rs557554295[chr2:238609453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More