EnhancerDB
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  3. rs557557896[chr1:226847818]
Enhancers that have rs557557896[chr1:226847818]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557557896[chr1:226847818]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226847811 226847826 TFAP2A JASPAR yes 35828998
chr1 226847811 226847826 TFAP2C JASPAR yes 35828999
chr1 226847813 226847825 INSM1 JASPAR yes 35829000
chr1 226847813 226847828 TFAP2A JASPAR yes 35829001
chr1 226847814 226847825 TFAP2A JASPAR yes 35829002
chr1 226847815 226847824 TFAP2A JASPAR yes 35829003
chr1 226847818 226847833 TFAP2A JASPAR yes 35829004
chr1 226847818 226847833 TFAP2C JASPAR yes 35829005
Genes associated with rs557557896[chr1:226847818], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More