EnhancerDB
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  3. rs55756460[chr17:774505]
Enhancers that have rs55756460[chr17:774505]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 769365 796155 enh4193
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs55756460[chr17:774505]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 773537 774528 ZNF274 GTRD no Blood (GM12878) 108227831
chr17 773554 774530 ZNF274 GTRD no Blood (GM12878) 108227832
chr17 774503 774518 TFAP2C JASPAR yes 52634725
Genes associated with rs55756460[chr17:774505], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 647654 657239 - GEMIN4 ENSG00000179409.6 657239 117266 Esophagus 0.326449 15206