EnhancerDB
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  3. rs55758249[chr6:108919646]
Enhancers that have rs55758249[chr6:108919646]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108896085 108921787 enh23478
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55758249[chr6:108919646]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108919636 108919649 ATF4 JASPAR yes 104182368
chr6 108919642 108919654 ZBTB7A JASPAR yes 104182369
chr6 108919644 108919653 RUNX2 JASPAR yes 104182370
chr6 108919644 108919654 RUNX3 JASPAR yes 104182371
Genes associated with rs55758249[chr6:108919646], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More