EnhancerDB
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  3. rs557588532[chr3:149331980]
Enhancers that have rs557588532[chr3:149331980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149284825 149341275 enh21022
Brain (SK-N-MC) Liver Colon (HCT116) Uterus Kidney Stomach Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557588532[chr3:149331980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149331971 149331983 TAL1 JASPAR yes 6514343
chr3 149331973 149331983 NEUROG2 JASPAR yes 6514344
chr3 149331973 149331983 OLIG1 JASPAR yes 6514345
chr3 149331973 149331983 OLIG3 JASPAR yes 6514346
chr3 149331973 149331985 TAL1 JASPAR yes 6514347
Genes associated with rs557588532[chr3:149331980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More