EnhancerDB
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  3. rs557595963[chr15:42235237]
Enhancers that have rs557595963[chr15:42235237]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557595963[chr15:42235237]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42235050 42236830 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651358
chr15 42235050 42236830 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135321
chr15 42235235 42235240 SP1 TRANSFAC yes 23008380
chr15 42235237 42235242 TFAP2A TRANSFAC yes 23008381
chr15 42235237 42235243 MZF1 JASPAR yes 23008382
Genes associated with rs557595963[chr15:42235237], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More