EnhancerDB
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  3. rs557668918[chr11:122554441]
Enhancers that have rs557668918[chr11:122554441]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs557668918[chr11:122554441]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122554434 122554444 ALX3 JASPAR yes 42018871
chr11 122554434 122554444 GSX2 JASPAR yes 42018872
chr11 122554434 122554444 MNX1 JASPAR yes 42018873
chr11 122554434 122554445 HOXA10 JASPAR yes 42018874
chr11 122554435 122554443 LMX1A JASPAR yes 42018875
chr11 122554435 122554443 LMX1B JASPAR yes 42018876
chr11 122554435 122554443 NKX6-1 JASPAR yes 42018877
chr11 122554435 122554443 NKX6-2 JASPAR yes 42018878
chr11 122554435 122554443 VAX1 JASPAR yes 42018879
chr11 122554435 122554443 VAX2 JASPAR yes 42018880
chr11 122554435 122554443 VSX1 JASPAR yes 42018881
chr11 122554435 122554443 VSX2 JASPAR yes 42018882
chr11 122554440 122554446 TBP TRANSFAC yes 42018883
Genes associated with rs557668918[chr11:122554441], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More