EnhancerDB
  1. Home
  2. SNP
  3. rs557680822[chr4:148672108]
Enhancers that have rs557680822[chr4:148672108]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 148667325 148718095 enh37177
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs557680822[chr4:148672108]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 148672104 148672118 GLIS2 JASPAR yes 93516668
chr4 148672104 148672118 GLIS3 JASPAR yes 93516669
chr4 148672105 148672115 SREBF1 JASPAR yes 93516670
chr4 148672105 148672115 SREBF2 JASPAR yes 93516671
Genes associated with rs557680822[chr4:148672108], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More