EnhancerDB
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  3. rs557768406[chr16:85288692]
Enhancers that have rs557768406[chr16:85288692]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557768406[chr16:85288692]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85287713 85289844 ZNF143 GTRD no Epithelial (MCF-7) 21722189
chr16 85287812 85289688 ZNF143 GTRD no Epithelial (MCF-7) 21722190
chr16 85287843 85290789 ZNF143 GTRD no Epithelial (MCF-7) 21722191
chr16 85287853 85289573 ZNF143 GTRD no Epithelial (MCF-7) 21722192
chr16 85287876 85289788 ZNF143 GTRD no Epithelial (MCF-7) 21722193
chr16 85287887 85292426 ZNF274 GTRD no Liver (HepG2) 21722195
chr16 85287903 85289774 ZNF143 GTRD no Epithelial (MCF-7) 21722196
chr16 85287906 85288791 ZNF143 GTRD no Epithelial (MCF-7) 21722197
chr16 85287916 85289878 ZNF143 GTRD no Epithelial (MCF-7) 21722198
chr16 85287934 85288786 ZNF143 GTRD no Epithelial (MCF-7) 21722199
chr16 85287937 85289740 ZNF143 GTRD no Epithelial (MCF-7) 21722200
chr16 85288055 85290640 ZNF143 GTRD no Epithelial (MCF-7) 21722201
chr16 85288062 85288764 ZNF143 GTRD no Epithelial (MCF-7) 21722202
chr16 85288062 85289833 ZNF143 GTRD no Epithelial (MCF-7) 21722203
chr16 85288071 85289770 ZNF143 GTRD no Epithelial (MCF-7) 21722204
chr16 85288073 85289589 ZNF143 GTRD no Epithelial (MCF-7) 21722205
chr16 85288097 85288695 ZNF143 GTRD no Epithelial (MCF-7) 21722206
chr16 85288123 85290651 TCF7L2 GTRD no Colon (HCT116) 21722208
chr16 85288136 85292102 ZNF274 GTRD no Liver (HepG2) 21722209
chr16 85288162 85289850 ZNF143 GTRD no Epithelial (MCF-7) 21722210
chr16 85288169 85290682 ZNF143 GTRD no Epithelial (MCF-7) 21722211
chr16 85288248 85289947 ZNF274 GTRD no Liver (HepG2) 21722213
chr16 85288267 85291932 ZNF143 GTRD no Epithelial (MCF-7) 21722214
chr16 85288267 85292354 ZNF274 GTRD no Liver (HepG2) 21722215
chr16 85288280 85289798 ZNF274 GTRD no Liver (HepG2) 21722216
chr16 85288282 85292138 ZNF143 GTRD no Epithelial (MCF-7) 21722217
chr16 85288285 85289627 ZNF274 GTRD no Liver (HepG2) 21722218
chr16 85288297 85289857 ZNF143 GTRD no Epithelial (MCF-7) 21722219
chr16 85288304 85290097 ZNF274 GTRD no Liver (HepG2) 21722220
chr16 85288311 85288893 TCF7L2 GTRD no Colon (HCT116) 21722221
chr16 85288312 85292454 ZNF274 GTRD no Liver (HepG2) 21722222
chr16 85288328 85289735 ZNF274 GTRD no Liver (HepG2) 21722223
chr16 85288343 85292291 ZNF274 GTRD no Liver (HepG2) 21722224
chr16 85288377 85289611 TCF7L2 GTRD no Colon (HCT116) 21722225
chr16 85288478 85292498 ZNF274 GTRD no Liver (HepG2) 21722226
chr16 85288515 85289711 ZNF143 GTRD no Epithelial (MCF-7) 21722227
chr16 85288535 85289617 ZNF274 GTRD no Liver (HepG2) 21722228
chr16 85288549 85289931 ZNF274 GTRD no Liver (HepG2) 21722229
chr16 85288553 85289560 ZNF143 GTRD no Epithelial (MCF-7) 21722230
chr16 85288555 85289895 ZNF143 GTRD no Epithelial (MCF-7) 21722231
chr16 85288569 85289503 ZNF274 GTRD no Liver (HepG2) 21722232
chr16 85288585 85289249 TCF7L2 GTRD no Colon (HCT116) 21722233
chr16 85288611 85289608 ZNF143 GTRD no Epithelial (MCF-7) 21722234
chr16 85288625 85289874 ZNF274 GTRD no Liver (HepG2) 21722235
chr16 85288628 85289839 ZNF274 GTRD no Liver (HepG2) 21722236
chr16 85288655 85289585 ZNF143 GTRD no Epithelial (MCF-7) 21722237
chr16 85288657 85289808 ZNF274 GTRD no Liver (HepG2) 21722238
chr16 85288662 85289742 ZNF143 GTRD no Epithelial (MCF-7) 21722239
chr16 85288679 85289526 ZNF274 GTRD no Liver (HepG2) 21722240
chr16 85288683 85289665 ZNF274 GTRD no Liver (HepG2) 21722241
chr16 85288684 85288695 E2F6 JASPAR yes 12039421
chr16 85288691 85288696 SP1 TRANSFAC yes 12039422
Genes associated with rs557768406[chr16:85288692], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More