EnhancerDB
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  3. rs557801878[chr11:12739925]
Enhancers that have rs557801878[chr11:12739925]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12737605 12756915 enh13786
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs557801878[chr11:12739925]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12739917 12739938 IRF1 JASPAR yes 37468682
chr11 12739920 12739934 IRF7 JASPAR yes 37468683
chr11 12739920 12739934 IRF8 JASPAR yes 37468684
chr11 12739921 12739935 STAT1 JASPAR yes 37468685
chr11 12739921 12739936 PRDM1 JASPAR yes 37468686
chr11 12739921 12739936 STAT2 JASPAR yes 37468687
chr11 12739921 12739939 IRF2 JASPAR yes 37468688
chr11 12739922 12739934 IRF1 JASPAR yes 37468689
Genes associated with rs557801878[chr11:12739925], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More