EnhancerDB
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  3. rs557826607[chr17:80499153]
Enhancers that have rs557826607[chr17:80499153]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557826607[chr17:80499153]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80499141 80499157 SOX8 JASPAR yes 56372394
chr17 80499147 80499168 IRF1 JASPAR yes 56372395
chr17 80499149 80499164 STAT2 JASPAR yes 56372396
chr17 80499150 80499164 STAT1 JASPAR yes 56372397
chr17 80499152 80499167 FOXP1 JASPAR yes 56372398
chr17 80499153 80499168 FOXP1 JASPAR yes 56372399
Genes associated with rs557826607[chr17:80499153], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More