EnhancerDB
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  3. rs55790537[chr5:172225877]
Enhancers that have rs55790537[chr5:172225877]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172225425 172225974 vista50175
VISTA
Transcript factors that have rs55790537[chr5:172225877]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172225552 172225899 CEBPB UCSC Txn Factor no Conserved 108537511
chr5 172225872 172225877 SP1 TRANSFAC yes 67828661
chr5 172225872 172225877 SP1 TRANSFAC yes 70763487
Genes associated with rs55790537[chr5:172225877], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More