EnhancerDB
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  3. rs557970628[chr17:56029440]
Enhancers that have rs557970628[chr17:56029440]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557970628[chr17:56029440]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56029425 56029440 RFX5 JASPAR yes 55004138
chr17 56029437 56029442 TFAP2A TRANSFAC yes 55004139
chr17 56029437 56029443 MZF1 JASPAR yes 55004140
chr17 56029439 56029444 ETS2 TRANSFAC yes 55004141
Genes associated with rs557970628[chr17:56029440], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More