EnhancerDB
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  3. rs557996529[chr1:235159956]
Enhancers that have rs557996529[chr1:235159956]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs557996529[chr1:235159956]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235159720 235160100 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21403238
chr1 235159810 235160110 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21403239
chr1 235159831 235162067 ZNF274 GTRD no Bone Marrow (K562) 21403240
chr1 235159868 235162277 ZNF274 GTRD no Blood (GM12878) 21403241
chr1 235159909 235162647 ZNF274 GTRD no Bone Marrow (K562) 21403242
chr1 235159948 235159960 NHLH1 JASPAR yes 36343893
chr1 235159955 235159969 RXRB JASPAR yes 36343894
chr1 235159955 235159969 RXRG JASPAR yes 36343895
Genes associated with rs557996529[chr1:235159956], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More