EnhancerDB
  1. Home
  2. SNP
  3. rs558076617[chr17:873814]
Enhancers that have rs558076617[chr17:873814]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
chr17 873777 873849 vista23631
VISTA
Transcript factors that have rs558076617[chr17:873814]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 873683 874026 ZNF143 GTRD no Epithelial (MCF-7) 21739057
chr17 873683 874026 ZNF143 GTRD no Epithelial (MCF-7) 108227857
chr17 873796 874280 ZNF143 GTRD no Epithelial (MCF-7) 21739058
chr17 873796 874280 ZNF143 GTRD no Epithelial (MCF-7) 108227858
chr17 873813 873817 H4TF2 TRANSFAC yes 21179901
chr17 873813 873817 H4TF2 TRANSFAC yes 52647328
Genes associated with rs558076617[chr17:873814], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More