EnhancerDB
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  3. rs558086836[chr5:77816395]
Enhancers that have rs558086836[chr5:77816395]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs558086836[chr5:77816395]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77816388 77816398 SP1 JASPAR yes 63595908
chr5 77816393 77816406 NFKB2 JASPAR yes 63595909
chr5 77816395 77816406 NFKB1 JASPAR yes 63595910
Genes associated with rs558086836[chr5:77816395], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More