EnhancerDB
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  3. rs558090083[chr2:37624083]
Enhancers that have rs558090083[chr2:37624083]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 37612694 37627055 enh33218
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Spleen Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs558090083[chr2:37624083]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 37624076 37624086 ALX3 JASPAR yes 73050508
chr2 37624076 37624086 GSX2 JASPAR yes 73050509
chr2 37624076 37624086 MIXL1 JASPAR yes 73050510
chr2 37624077 37624085 ISX JASPAR yes 73050511
chr2 37624077 37624085 LHX9 JASPAR yes 73050512
chr2 37624077 37624085 LMX1B JASPAR yes 73050513
chr2 37624077 37624085 PRRX1 JASPAR yes 73050514
chr2 37624077 37624085 RAX2 JASPAR yes 73050515
chr2 37624077 37624085 SHOX JASPAR yes 73050516
chr2 37624077 37624085 UNCX JASPAR yes 73050517
chr2 37624078 37624093 FOXP1 JASPAR yes 73050518
chr2 37624078 37624099 IRF1 JASPAR yes 73050519
chr2 37624079 37624100 IRF1 JASPAR yes 73050520
chr2 37624080 37624095 FOXP1 JASPAR yes 73050521
chr2 37624081 37624096 FOXP1 JASPAR yes 73050522
chr2 37624082 37624088 TBP TRANSFAC yes 73050523
chr2 37624082 37624097 FOXP1 JASPAR yes 73050524
chr2 37624082 37624103 IRF1 JASPAR yes 73050525
chr2 37624083 37624098 FOXP1 JASPAR yes 73050526
chr2 37624083 37624104 IRF1 JASPAR yes 73050527
Genes associated with rs558090083[chr2:37624083], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More