EnhancerDB
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  3. rs558101550[chr17:856679]
Enhancers that have rs558101550[chr17:856679]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs558101550[chr17:856679]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 856673 856693 RREB1 JASPAR yes 52644711
chr17 856674 856684 SP1 JASPAR yes 52644712
chr17 856675 856695 RREB1 JASPAR yes 52644713
chr17 856676 856682 SP1 TRANSFAC yes 52644714
chr17 856676 856686 SP1 JASPAR yes 52644715
chr17 856676 856686 ZNF740 JASPAR yes 52644716
Genes associated with rs558101550[chr17:856679], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More