EnhancerDB
  1. Home
  2. SNP
  3. rs55812880[chr1:157980372]
Enhancers that have rs55812880[chr1:157980372]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 157969514 158001213 enh12308
Brain (SK-N-MC) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs55812880[chr1:157980372]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 157980286 157980750 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21344142
chr1 157980286 157980750 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107838141
chr1 157980357 157980374 RXRA JASPAR yes 32456920
chr1 157980367 157980382 HNF4A JASPAR yes 32456921
chr1 157980368 157980382 NR2F1 JASPAR yes 32456922
chr1 157980368 157980383 HNF4G JASPAR yes 32456923
chr1 157980371 157980385 IRF7 JASPAR yes 32456924
Genes associated with rs55812880[chr1:157980372], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More