EnhancerDB
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  3. rs558182294[chr6:30753229]
Enhancers that have rs558182294[chr6:30753229]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558182294[chr6:30753229]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30753211 30753232 IRF1 JASPAR yes 101049277
chr6 30753215 30753229 IRF7 JASPAR yes 101049281
chr6 30753216 30753231 FOXP1 JASPAR yes 101049282
chr6 30753218 30753233 FOXP1 JASPAR yes 101049283
chr6 30753221 30753231 HOXA13 JASPAR yes 101049284
chr6 30753221 30753231 HOXB13 JASPAR yes 101049285
chr6 30753221 30753231 HOXD13 JASPAR yes 101049286
chr6 30753221 30753232 HOXA10 JASPAR yes 101049287
chr6 30753222 30753231 CDX1 JASPAR yes 101049288
chr6 30753222 30753233 CDX2 JASPAR yes 101049289
Genes associated with rs558182294[chr6:30753229], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More