EnhancerDB
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  3. rs558225400[chr16:29165377]
Enhancers that have rs558225400[chr16:29165377]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29150646 29173335 enh16623
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Lung (A549) Stomach Placenta Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs558225400[chr16:29165377]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29165363 29165384 ZNF263 JASPAR yes 10245788
chr16 29165369 29165390 IRF1 JASPAR yes 10245789
chr16 29165370 29165380 NFATC3 JASPAR yes 10245790
chr16 29165371 29165386 IRF9 JASPAR yes 10245791
chr16 29165372 29165386 IRF7 JASPAR yes 10245792
chr16 29165372 29165386 IRF8 JASPAR yes 10245793
chr16 29165373 29165387 STAT1 JASPAR yes 10245794
chr16 29165373 29165388 PRDM1 JASPAR yes 10245795
chr16 29165373 29165388 STAT2 JASPAR yes 10245796
chr16 29165373 29165391 IRF2 JASPAR yes 10245797
Genes associated with rs558225400[chr16:29165377], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More