EnhancerDB
  1. Home
  2. SNP
  3. rs558235077[chr16:4349524]
Enhancers that have rs558235077[chr16:4349524]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs558235077[chr16:4349524]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4348958 4349528 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21686547
chr16 4348958 4349528 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108176206
chr16 4349006 4349546 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108176208
chr16 4349070 4349534 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686555
chr16 4349070 4349534 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108176220
chr16 4349169 4349605 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108176242
chr16 4349264 4349524 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686571
chr16 4349264 4349524 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108176245
chr16 4349271 4349620 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686572
chr16 4349271 4349620 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108176246
chr16 4349308 4349618 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108176247
chr16 4349514 4349527 SCRT2 JASPAR yes 9268439
chr16 4349514 4349529 SCRT1 JASPAR yes 9268440
chr16 4349514 4349529 ZIC4 JASPAR yes 9268441
chr16 4349515 4349529 ZIC1 JASPAR yes 9268442
chr16 4349518 4349527 SNAI2 JASPAR yes 9268443
chr16 4349518 4349528 FIGLA JASPAR yes 9268444
chr16 4349518 4349528 ID4 JASPAR yes 9268445
chr16 4349518 4349528 MSC JASPAR yes 9268446
chr16 4349518 4349528 MYF6 JASPAR yes 9268447
chr16 4349518 4349528 TCF3 JASPAR yes 9268448
chr16 4349518 4349528 TCF4 JASPAR yes 9268449
chr16 4349520 4349529 ZEB1 JASPAR yes 9268450
Genes associated with rs558235077[chr16:4349524], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More