EnhancerDB
  1. Home
  2. SNP
  3. rs55827376[chr1:9225938]
Enhancers that have rs55827376[chr1:9225938]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9220009 9228971 enh11480
Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs55827376[chr1:9225938]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9224562 9226488 ZNF143 GTRD no Epithelial (MCF-7) 107802008
chr1 9224562 9226488 ZNF143 GTRD no Epithelial (MCF-7) 107802009
chr1 9225938 9225956 ESR2 JASPAR yes 26624516
Genes associated with rs55827376[chr1:9225938], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More