EnhancerDB
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  3. rs558285568[chr19:5942711]
Enhancers that have rs558285568[chr19:5942711]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558285568[chr19:5942711]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5942708 5942723 FOXP1 JASPAR yes 112246075
chr19 5942709 5942724 FOXP1 JASPAR yes 112246076
chr19 5942710 5942725 FOXP1 JASPAR yes 112246077
chr19 5942710 5942731 IRF1 JASPAR yes 112246078
chr19 5942711 5942726 FOXP1 JASPAR yes 112246079
chr19 5942711 5942732 IRF1 JASPAR yes 112246080
Genes associated with rs558285568[chr19:5942711], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More