EnhancerDB
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  3. rs558286200[chr19:10989096]
Enhancers that have rs558286200[chr19:10989096]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10983285 11012541 enh5003
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs558286200[chr19:10989096]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10988783 10989357 ZNF143 GTRD no Epithelial (MCF-7) 21849139
chr19 10988783 10989357 ZNF143 GTRD no Epithelial (MCF-7) 108384222
chr19 10988814 10989429 ZNF274 GTRD no Bone Marrow (K562) 21849140
chr19 10988814 10989429 ZNF274 GTRD no Bone Marrow (K562) 108384223
chr19 10988908 10989572 TCF7L2 GTRD no Colon (HCT116) 21849141
chr19 10988908 10989572 TCF7L2 GTRD no Colon (HCT116) 108384224
chr19 10988908 10989711 ZNF143 GTRD no Epithelial (MCF-7) 21849142
chr19 10988908 10989711 ZNF143 GTRD no Epithelial (MCF-7) 108384225
chr19 10988919 10989703 ZNF143 GTRD no Epithelial (MCF-7) 21849143
chr19 10988919 10989703 ZNF143 GTRD no Epithelial (MCF-7) 108384226
chr19 10988966 10989417 ZNF143 GTRD no Epithelial (MCF-7) 21849144
chr19 10988966 10989417 ZNF143 GTRD no Epithelial (MCF-7) 108384227
chr19 10988975 10989450 ZNF274 GTRD no Blood (GM12878) 21849145
chr19 10988975 10989450 ZNF274 GTRD no Blood (GM12878) 108384228
chr19 10989046 10989416 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21849146
chr19 10989046 10989416 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108384229
chr19 10989081 10989679 ZNF274 GTRD no Blood (GM12878) 21849147
chr19 10989081 10989679 ZNF274 GTRD no Blood (GM12878) 108384230
Genes associated with rs558286200[chr19:10989096], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More