EnhancerDB
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  3. rs558289853[chr15:42210194]
Enhancers that have rs558289853[chr15:42210194]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558289853[chr15:42210194]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42210178 42210197 REST JASPAR yes 23005004
chr15 42210191 42210203 FOXI1 JASPAR yes 23005005
chr15 42210194 42210205 FOXA1 JASPAR yes 23005006
Genes associated with rs558289853[chr15:42210194], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More