EnhancerDB
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  3. rs558309708[chr2:240188133]
Enhancers that have rs558309708[chr2:240188133]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558309708[chr2:240188133]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240188123 240188135 TFAP2A JASPAR yes 82223431
chr2 240188123 240188135 TFAP2B JASPAR yes 82223432
chr2 240188123 240188136 TFAP2A JASPAR yes 82223433
chr2 240188123 240188136 TFAP2B JASPAR yes 82223434
chr2 240188123 240188136 TFAP2C JASPAR yes 82223435
chr2 240188123 240188143 ESR1 JASPAR yes 82223436
chr2 240188124 240188135 EBF1 JASPAR yes 82223437
chr2 240188127 240188145 ESR2 JASPAR yes 82223438
chr2 240188131 240188136 SP1 TRANSFAC yes 82223439
Genes associated with rs558309708[chr2:240188133], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More