EnhancerDB
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  3. rs558340797[chr4:87894408]
Enhancers that have rs558340797[chr4:87894408]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 87874985 87906151 enh8077
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Liver (HepG2) Muscle (A673) Heart
chr4 87894121 87894618 vista45328
VISTA
Transcript factors that have rs558340797[chr4:87894408]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 87894140 87894417 CEBPB UCSC Txn Factor no Conserved 108533065
chr4 87894398 87894414 SOX4 JASPAR yes 49255496
chr4 87894398 87894414 SOX4 JASPAR yes 91088614
chr4 87894403 87894409 NFIC JASPAR yes 49255497
chr4 87894403 87894409 NFIC JASPAR yes 91088615
Genes associated with rs558340797[chr4:87894408], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More