EnhancerDB
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  3. rs55835136[chr16:88838071]
Enhancers that have rs55835136[chr16:88838071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs55835136[chr16:88838071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88835834 88838414 POLR2A UCSC Txn Factor no Conserved 108223405
chr16 88835834 88838414 POLR2A UCSC Txn Factor no Conserved 108223406
chr16 88835834 88838414 POLR2A UCSC Txn Factor no Conserved 108223407
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 21736969
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223440
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223441
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223442
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223443
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 21736971
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223445
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223446
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223447
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223448
chr16 88836679 88839683 TCF7L2 GTRD no Colon (HCT116) 21736973
chr16 88836679 88839683 TCF7L2 GTRD no Colon (HCT116) 108223451
chr16 88836679 88839683 TCF7L2 GTRD no Colon (HCT116) 108223452
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 21736980
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 108223459
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 108223460
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 108223461
chr16 88837097 88841116 ZNF143 GTRD no Epithelial (MCF-7) 21736982
chr16 88837097 88841116 ZNF143 GTRD no Epithelial (MCF-7) 108223463
chr16 88837097 88841116 ZNF143 GTRD no Epithelial (MCF-7) 108223464
chr16 88837097 88841116 ZNF143 GTRD no Epithelial (MCF-7) 108223465
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 21736984
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 108223467
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 108223468
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 108223469
chr16 88837494 88839570 ZNF143 GTRD no Epithelial (MCF-7) 21737042
chr16 88837494 88839570 ZNF143 GTRD no Epithelial (MCF-7) 108223540
chr16 88837494 88839570 ZNF143 GTRD no Epithelial (MCF-7) 108223541
chr16 88837646 88838209 TCF7L2 GTRD no Colon (HCT116) 21737044
chr16 88837646 88838209 TCF7L2 GTRD no Colon (HCT116) 108223543
chr16 88837828 88841387 ZNF143 GTRD no Epithelial (MCF-7) 21737045
chr16 88837828 88841387 ZNF143 GTRD no Epithelial (MCF-7) 108223544
chr16 88837828 88841387 ZNF143 GTRD no Epithelial (MCF-7) 108223545
chr16 88838051 88838072 ZNF263 JASPAR yes 12302553
Genes associated with rs55835136[chr16:88838071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More