EnhancerDB
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  3. rs558436[chr16:88847681]
Enhancers that have rs558436[chr16:88847681]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr16 88847421 88847701 vista23519
VISTA
Transcript factors that have rs558436[chr16:88847681]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 21737173
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 108223690
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 108223691
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 108223692
chr16 88847171 88848094 TCF7L2 GTRD no Colon (HCT116) 21737174
chr16 88847171 88848094 TCF7L2 GTRD no Colon (HCT116) 108223693
chr16 88847194 88848450 ZNF143 GTRD no Epithelial (MCF-7) 21737175
chr16 88847194 88848450 ZNF143 GTRD no Epithelial (MCF-7) 108223694
chr16 88847194 88848450 ZNF143 GTRD no Epithelial (MCF-7) 108223695
chr16 88847388 88847904 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21737176
chr16 88847388 88847904 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108223696
chr16 88847399 88847835 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737177
chr16 88847399 88847835 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223697
chr16 88847402 88847842 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737178
chr16 88847402 88847842 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223698
chr16 88847402 88848432 ZNF143 GTRD no Epithelial (MCF-7) 21737179
chr16 88847402 88848432 ZNF143 GTRD no Epithelial (MCF-7) 108223699
chr16 88847402 88848432 ZNF143 GTRD no Epithelial (MCF-7) 108223700
chr16 88847410 88848589 MYC UCSC Txn Factor no Conserved 108223701
chr16 88847410 88848589 MYC UCSC Txn Factor no Conserved 108223702
chr16 88847411 88847787 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737180
chr16 88847411 88847787 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223703
chr16 88847444 88847880 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21737181
chr16 88847444 88847880 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108223704
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 21737182
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 108223705
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 108223706
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 108223707
chr16 88847494 88847774 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737183
chr16 88847494 88847774 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223708
chr16 88847495 88847865 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737184
chr16 88847495 88847865 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223709
chr16 88847510 88848096 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737185
chr16 88847510 88848096 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223710
chr16 88847515 88847791 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737186
chr16 88847515 88847791 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223711
chr16 88847532 88847828 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21737187
chr16 88847532 88847828 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108223712
chr16 88847533 88847897 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21737188
chr16 88847533 88847897 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108223713
chr16 88847541 88848051 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737189
chr16 88847541 88848051 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223714
chr16 88847549 88848509 ZNF143 GTRD no Epithelial (MCF-7) 21737190
chr16 88847549 88848509 ZNF143 GTRD no Epithelial (MCF-7) 108223715
chr16 88847549 88848509 ZNF143 GTRD no Epithelial (MCF-7) 108223716
chr16 88847553 88847829 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21737191
chr16 88847553 88847829 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108223717
chr16 88847563 88847803 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21737192
chr16 88847563 88847803 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108223718
chr16 88847572 88847816 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737193
chr16 88847572 88847816 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223719
chr16 88847592 88847796 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737194
chr16 88847592 88847796 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223720
chr16 88847592 88848048 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737195
chr16 88847592 88848048 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223721
chr16 88847612 88848108 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737196
chr16 88847612 88848108 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223722
chr16 88847618 88848299 ZNF143 GTRD no Epithelial (MCF-7) 21737197
chr16 88847618 88848299 ZNF143 GTRD no Epithelial (MCF-7) 108223723
chr16 88847618 88848299 ZNF143 GTRD no Epithelial (MCF-7) 108223724
chr16 88847623 88848127 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737198
chr16 88847623 88848127 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223725
chr16 88847626 88847712 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737199
chr16 88847626 88847712 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223726
chr16 88847651 88848107 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737200
chr16 88847651 88848107 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223727
chr16 88847659 88848246 ZNF274 GTRD no Bone Marrow (K562) 21737201
chr16 88847659 88848246 ZNF274 GTRD no Bone Marrow (K562) 108223728
chr16 88847659 88848246 ZNF274 GTRD no Bone Marrow (K562) 108223729
chr16 88847662 88848212 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21737202
chr16 88847662 88848212 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108223730
chr16 88847662 88848212 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108223731
chr16 88847676 88848072 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737203
chr16 88847676 88848072 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223732
chr16 88847681 88847701 RREB1 JASPAR yes 12303826
chr16 88847681 88847701 RREB1 JASPAR yes 49418910
Genes associated with rs558436[chr16:88847681], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More