EnhancerDB
  1. Home
  2. SNP
  3. rs558440599[chr1:16127455]
Enhancers that have rs558440599[chr1:16127455]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs558440599[chr1:16127455]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16127446 16127456 MSC JASPAR yes 27003061
chr1 16127450 16127470 TBX19 JASPAR yes 27003062
chr1 16127452 16127468 T JASPAR yes 27003063
Genes associated with rs558440599[chr1:16127455], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More