EnhancerDB
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  3. rs558506427[chr17:46079573]
Enhancers that have rs558506427[chr17:46079573]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46058151 46084696 enh4448
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs558506427[chr17:46079573]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46078877 46079745 ZNF274 GTRD no Bone Marrow (K562) 108267669
chr17 46078947 46083833 ZNF274 GTRD no Bone Marrow (K562) 108267670
chr17 46078947 46083833 ZNF274 GTRD no Bone Marrow (K562) 108267671
chr17 46078947 46083833 ZNF274 GTRD no Bone Marrow (K562) 108267672
chr17 46079569 46079580 CDX2 JASPAR yes 54551515
chr17 46079570 46079581 HOXA10 JASPAR yes 54551516
chr17 46079571 46079580 CDX1 JASPAR yes 54551517
chr17 46079571 46079581 HOXA13 JASPAR yes 54551518
chr17 46079571 46079581 HOXB13 JASPAR yes 54551519
chr17 46079571 46079581 HOXD13 JASPAR yes 54551520
Genes associated with rs558506427[chr17:46079573], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More