EnhancerDB
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  3. rs558511345[chr15:42233440]
Enhancers that have rs558511345[chr15:42233440]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558511345[chr15:42233440]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42233439 42233451 DBP JASPAR yes 23008106
chr15 42233439 42233451 HLF JASPAR yes 23008107
chr15 42233439 42233451 JDP2 JASPAR yes 23008108
chr15 42233439 42233454 JUND JASPAR yes 23008109
Genes associated with rs558511345[chr15:42233440], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More