EnhancerDB
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  3. rs558550975[chr5:173210804]
Enhancers that have rs558550975[chr5:173210804]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558550975[chr5:173210804]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173210799 173210806 MEIS1 JASPAR yes 67904677
chr5 173210804 173210825 IRF1 JASPAR yes 67904678
chr5 173210804 173210825 ZNF263 JASPAR yes 67904679
Genes associated with rs558550975[chr5:173210804], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More