EnhancerDB
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  3. rs558557472[chr15:42210444]
Enhancers that have rs558557472[chr15:42210444]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558557472[chr15:42210444]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42210442 42210457 FOXA1 JASPAR yes 23005043
chr15 42210444 42210455 FOXP2 JASPAR yes 23005044
chr15 42210444 42210456 FOXC2 JASPAR yes 23005045
Genes associated with rs558557472[chr15:42210444], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More