EnhancerDB
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  3. rs558570410[chr6:112312183]
Enhancers that have rs558570410[chr6:112312183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112291245 112321335 enh23518
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen
Transcript factors that have rs558570410[chr6:112312183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112312168 112312183 FOXA1 JASPAR yes 104395105
chr6 112312170 112312183 POU2F2 JASPAR yes 104395107
chr6 112312170 112312184 POU1F1 JASPAR yes 104395108
chr6 112312171 112312183 POU3F1 JASPAR yes 104395111
chr6 112312171 112312183 POU3F2 JASPAR yes 104395112
chr6 112312171 112312184 POU3F3 JASPAR yes 104395113
chr6 112312172 112312184 POU2F1 JASPAR yes 104395115
chr6 112312175 112312189 POU4F1 JASPAR yes 104395122
chr6 112312180 112312191 PHOX2A JASPAR yes 104395123
chr6 112312180 112312191 PROP1 JASPAR yes 104395124
chr6 112312182 112312194 FOXI1 JASPAR yes 104395125
chr6 112312182 112312197 FOXP1 JASPAR yes 104395126
chr6 112312183 112312194 FOXP2 JASPAR yes 104395127
chr6 112312183 112312195 FOXC2 JASPAR yes 104395128
chr6 112312183 112312197 FOXF2 JASPAR yes 104395129
Genes associated with rs558570410[chr6:112312183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More