EnhancerDB
  1. Home
  2. SNP
  3. rs55857135[chr3:124559908]
Enhancers that have rs55857135[chr3:124559908]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124541185 124560055 enh20881
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs55857135[chr3:124559908]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124559904 124559917 NR2F1 JASPAR yes 5406503
chr3 124559906 124559917 ESRRA JASPAR yes 5406504
chr3 124559906 124559917 ESRRB JASPAR yes 5406505
chr3 124559907 124559915 NR4A2 JASPAR yes 5406506
chr3 124559908 124559918 RORA JASPAR yes 5406507
chr3 124559908 124559922 NR2F1 JASPAR yes 5406508
chr3 124559908 124559923 HNF4G JASPAR yes 5406509
Genes associated with rs55857135[chr3:124559908], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More