EnhancerDB
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  3. rs558583509[chr19:2625373]
Enhancers that have rs558583509[chr19:2625373]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs558583509[chr19:2625373]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 21837677
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363248
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363249
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363250
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363251
chr19 2622272 2625966 ZNF274 GTRD no Blood (GM12878) 21837827
chr19 2622272 2625966 ZNF274 GTRD no Blood (GM12878) 108363412
chr19 2622272 2625966 ZNF274 GTRD no Blood (GM12878) 108363413
chr19 2624209 2625468 ZNF274 GTRD no Cervix (HeLa-S3) 21837828
chr19 2624209 2625468 ZNF274 GTRD no Cervix (HeLa-S3) 108363414
chr19 2624345 2625409 TCF7L2 GTRD no Colon (HCT116) 21837830
chr19 2624345 2625409 TCF7L2 GTRD no Colon (HCT116) 108363416
chr19 2624356 2625912 ZNF274 GTRD no Blood (GM12878) 21837833
chr19 2624356 2625912 ZNF274 GTRD no Blood (GM12878) 108363419
chr19 2624356 2625912 ZNF274 GTRD no Blood (GM12878) 108363420
chr19 2624357 2625538 ZNF274 GTRD no Blood (GM12878) 21837835
chr19 2624357 2625538 ZNF274 GTRD no Blood (GM12878) 108363422
chr19 2624374 2625381 ZNF143 GTRD no Epithelial (MCF-7) 108363426
chr19 2624402 2625951 ZNF274 GTRD no Blood (GM12878) 21837837
chr19 2624402 2625951 ZNF274 GTRD no Blood (GM12878) 108363429
chr19 2624402 2625951 ZNF274 GTRD no Blood (GM12878) 108363430
chr19 2624423 2625400 ZNF274 GTRD no Blood (GM12878) 21837840
chr19 2624423 2625400 ZNF274 GTRD no Blood (GM12878) 108363436
chr19 2624481 2625400 ZNF274 GTRD no Cervix (HeLa-S3) 21837854
chr19 2624481 2625400 ZNF274 GTRD no Cervix (HeLa-S3) 108363457
chr19 2624512 2625407 TCF7L2 GTRD no Colon (HCT116) 21837864
chr19 2624512 2625407 TCF7L2 GTRD no Colon (HCT116) 108363467
chr19 2624551 2625747 TCF7L2 GTRD no Colon (HCT116) 21837882
chr19 2624551 2625747 TCF7L2 GTRD no Colon (HCT116) 108363492
chr19 2624551 2625747 TCF7L2 GTRD no Colon (HCT116) 108363493
chr19 2625368 2625389 IRF1 JASPAR yes 112085169
chr19 2625372 2625384 IRF1 JASPAR yes 112085170
chr19 2625373 2625388 MEF2A JASPAR yes 112085171
Genes associated with rs558583509[chr19:2625373], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More