EnhancerDB
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  3. rs558682835[chr12:111863455]
Enhancers that have rs558682835[chr12:111863455]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 111858009 111880135 enh2602
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs558682835[chr12:111863455]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 111863448 111863457 SOX9 JASPAR yes 123746869
chr12 111863448 111863464 SOX4 JASPAR yes 123746870
chr12 111863449 111863464 SOX21 JASPAR yes 123746871
Genes associated with rs558682835[chr12:111863455], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More